About Synteruptor

Synteruptor is a tool designed to find synteny breaks between closely related bacterial genomes. The breaks found can be explored with this web interface to find clusters of genes of interest.

Last update: 2020-11-17
Contact: olivier.lespinet at i2bc.paris-saclay.fr Download Synteruptor

How to use the Synteruptor website

Available databases

The following databases were generated with preselected genomes and can be freely explored:

Direct access to the genomic islands

The genomic islands identified in the previous databases can be directly accessed with their identifier:

Database creation

Upload your genomes to create a Synteruptor database:

  • Link to University Paris-Saclay
  • Link to I2BC
  • Link to DYNAMIC
  • Link to INRAE
  • Link to UL